JUNE 2015 • VOLUME 3, NO. 3 [PDF]

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

EUKARYOTES Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride

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Xiaoqian Shi-Kunne, Michael F. Seidl, Luigi Faino, Bart P. H. J. Thomma e00307-15

Ying Yang, Min Chen, Zongwei Li, Abdullah M. S. Al-Hatmi, Qiang Ye, Huipeng Chen, Shengqi Wang, Wanqing Liao, Junzhi Wang Draft Genome Sequence of Sporidiobolus salmonicolor CBS 6832, a Red-Pigmented Basidiomycetous Yeast

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Marco A. Coelho, João M. G. C. F. Almeida, Chris Todd Hittinger, Paula Gonçalves Draft Genome Sequence of the Archiascomycetous Yeast Saitoella complicata

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Kenta Yamauchi, Shinji Kondo, Makiko Hamamoto, Yurika Takahashi, Yoshitoshi Ogura, Tetsuya Hayashi, Hiromi Nishida Draft Genome Sequence of Mycoparasite Clonostachys rosea Strain 67-1

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Zhan-Bin Sun, Man-Hong Sun, Shi-Dong Li High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540

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Leticia Vega-Alvarado, Jorge Gómez-Angulo, Zazil Escalante-García, Ricardo Grande, Anne Gschaedler-Mathis, Lorena Amaya-Delgado, Alejandro Sanchez-Flores, Javier Arrizon Draft Whole-Genome Sequence of the Biocontrol Agent Trichoderma harzianum T6776

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Riccardo Baroncelli, Giulia Piaggeschi, Lisa Fiorini, Edoardo Bertolini, Antonio Zapparata, Mario Enrico Pè, Sabrina Sarrocco, Giovanni Vannacci Draft Genome Sequence of the Pathogenic Oomycete Pythium insidiosum Strain Pi-S, Isolated from a Patient with Pythiosis

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Thidarat Rujirawat, Preecha Patumcharoenpol, Tassanee Lohnoo, Wanta Yingyong, Tassanee Lerksuthirat, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Laura J. Grenville-Briggs, Gagan Garg, Weerayuth Kittichotirat, Theerapong Krajaejun Draft Genome Sequence of the Rice Kernel Smut Tilletia horrida Strain QB-1

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Na Wang, Peng Ai, Yangfan Tang, Jing Zhang, Xiaojuan Dai, Ping Li, Aiping Zheng PROKARYOTES Complete Genome Sequence of Cyanobacterium Geminocystis sp. Strain NIES-3708, Which Performs Type II Complementary Chromatic Acclimation

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Yuu Hirose, Mitsunori Katayama, Yoshiyuki Ohtsubo, Naomi Misawa, Erica Iioka, Wataru Suda, Kenshiro Oshima, Mitsumasa Hanaoka, Kan Tanaka, Toshihiko Eki, Masahiko Ikeuchi, Yo Kikuchi, Makoto Ishida, Masahira Hattori Genome Sequences of Pseudoalteromonas Strains ATCC BAA-314, ATCC 70018, and ATCC 70019 Scott A. Givan, Ming-Yi Zhou, Karen Bromert, Nathan Bivens, Linda Fleet Chapman

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Genome Sequence of Penicillium capsulatum Strain ATCC 48735, a Rare Penicillium Species Used in Paper Manufactories but That Recently Caused Invasive Infection

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Bordetella bronchiseptica KU1201, the First Isolation Source of Arylmalonate Decarboxylase

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Shosuke Yoshida, Junichi Enoki, Risa Hemmi, Robert Kourist, Norifumi Kawakami, Kenji Miyamoto Complete Genome Sequence of Clavibacter michiganensis subsp. insidiosus R1-1 Using PacBio Single-Molecule Real-Time Technology

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You Lu, Deborah A. Samac, Jane Glazebrook, Carol A. Ishimaru e00403-15

K. V. Shur, K. M. Klimina, N. V. Zakharevich, D. A. Maslov, O. B. Bekker, M. V. Zaychikova, E. Y. Kamaev, M. A. Kravchenko, S. N. Skornyakov, Y. Zhang, V. N. Danilenko Genome Sequence of a Carbapenem-Resistant Strain of Ralstonia mannitolilytica

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Masato Suzuki, Hisaaki Nishio, Kohsuke Asagoe, Kaneyuki Kida, Satowa Suzuki, Mari Matsui, Keigo Shibayama Draft Genome Sequence of Se(IV)-Reducing Bacterium Pseudomonas migulae ES3-33

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Xuanji Li, Witold Kot, Dan Wang, Shixue Zheng, Gejiao Wang, Lars H. Hansen, Christopher Rensing Complete Genome Sequence of Martelella endophytica YC6887, Which Has Antifungal Activity Associated with a Halophyte

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Ajmal Khan, Haji Khan, Eu Jin Chung, Mohammad T. Hossain, Young Ryun Chung Draft Genome Sequence of a Phthalate Ester-Degrading Bacterium, Rhizobium sp. LMB-1, Isolated from Cultured Soil

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Wen-Juan Tang, Ying Zhou, Bang-Ce Ye Complete Genome Sequence Analysis of Bacillus subtilis T30

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Shuang-yong Xu, Matthew Boitano, Tyson A. Clark, Tamas Vincze, Alexey Fomenkov, Sanjay Kumar, Priscilla Hiu-Mei Too, Danila Gonchar, Sergey K. Degtyarev, Richard J. Roberts Genome Sequence of Halomonas sp. Strain KO116, an Ionic Liquid-Tolerant Marine Bacterium Isolated from a Lignin-Enriched Seawater Microcosm

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Kaela B. O’Dell, Hannah L. Woo, Sagar Utturkar, Dawn Klingeman, Steven D. Brown, Terry C. Hazen Insights on Quorum-Quenching Properties of Lysinibacillus fusiformis Strain RB21, a Malaysian Municipal Solid-Waste Landfill Soil Isolate, via Complete Genome Sequence Analysis

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Delicia Yong, Robson Ee, Yan-Lue Lim, Chien-Yi Chang, Wai-Fong Yin, Kok-Gan Chan Draft Genome Sequence of Paenibacillus polymyxa EBL06, a Plant Growth-Promoting Bacterium Isolated from Wheat Phyllosphere

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Shengxian Liang, Decai Jin, Xinxin Wang, Haiyan Fan, Zhihui Bai Draft Genome Sequence of Brucella abortus Virulent Strain 544

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D. K. Singh, Ashok Kumar, A. K. Tiwari, Jagadesan Sankarasubramanian, Udayakumar S. Vishnu, Jayavel Sridhar, Paramasamy Gunasekaran, Jeyaprakash Rajendhran

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Draft Genome Sequence of Mycobacterium tuberculosis Strain E186hv of Beijing B0/W Lineage with Reduced Virulence

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of the Polyhydroxyalkanoate-Producing Bacterium Burkholderia sacchari LMG 19450 Isolated from Brazilian Sugarcane Plantation Soil

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Paulo Moises Raduan Alexandrino, Thatiane Teixeira Mendonça, Linda Priscila Guamán Bautista, Juliano Cherix, Gabriela Cazonato Lozano-Sakalauskas, André Fujita, Edmar Ramos Filho, Paul Long, Gabriel Padilla, Marilda Keico Taciro, José Gregório Cabrera Gomez, Luiziana Ferreira Silva Draft Genome Sequence of Citrobacter rodentium DBS100 (ATCC 51459), a Primary Model of Enterohemorrhagic Escherichia coli Virulence

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Draft Genome Sequence of Pseudomonas sp. Strain 10-1B, a Polycyclic Aromatic Hydrocarbon Degrader in Contaminated Soil

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Maryam Bello-Akinosho, Rasheed Adeleke, Dirk Swanevelder, Mapitsi Thantsha Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601

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Shaila Yerrapragada, Animesh Shukla, Kymberlie Hallsworth-Pepin, Kwangmin Choi, Aye Wollam, Sandra Clifton, Xiang Qin, Donna Muzny, Sriram Raghuraman, Haleh Ashki, Akif Uzman, Sarah K. Highlander, Bartlomiej G. Fryszczyn, George E. Fox, Madhan R. Tirumalai, Yamei Liu, Sun Kim, David M. Kehoe, George M. Weinstock Draft Genome Sequence of Arthrobacter chlorophenolicus Strain Mor30.16, Isolated from the Bean Rhizosphere

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José Antonio Miranda-Ríos, José Augusto Ramírez-Trujillo, Bárbara Nova-Franco, Luis Fernando Lozano-Aguirre Beltrán, Gabriel Iturriaga, Ramón Suárez-Rodríguez Complete Closed Genome Sequences of a Mannheimia haemolytica Serotype A1 Leukotoxin Deletion Mutant and Its Wild-Type Parent Strain

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Michael P. Heaton, Gregory P. Harhay, Timothy P. L. Smith, James L. Bono, Carol G. Chitko-McKown Genome Sequence of Rhodococcus sp. Strain PML026, a Trehalolipid Biosurfactant Producer and Biodegrader of Oil and Alkanes

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C. M. Sambles, D. A. White Complete Genome Sequence of Biocontrol Strain Pseudomonas fluorescens LBUM223

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Roxane Roquigny, Tanya Arseneault, Vijay J. Gadkar, Amy Novinscak, David L. Joly, Martin Filion First Draft Genome Sequence of a Human Coxiella burnetii Isolate, Originating from the Largest Q Fever Outbreak Ever Reported, the Netherlands, 2007 to 2010

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J. A. Hammerl, K. Mertens, L. D. Sprague, V. H. Hackert, J. Buijs, C. J. Hoebe, K. Henning, H. Neubauer, S. Al Dahouk Complete Genome Sequence of an Enterotoxigenic Bacteroides fragilis Clinical Isolate

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Anastasia S. Nikitina, Daria D. Kharlampieva, Vladislav V. Babenko, Dmitriy A. Shirokov, Maria T. Vakhitova, Aleksandr I. Manolov, Andrei N. Shkoporov, Anastasia E. Taraskina, Valentin A. Manuvera, Vassili N. Lazarev, Elena S. Kostryukova Complete Genome Sequences of Two Strains of “Candidatus Filomicrobium marinum,” a Methanesulfonate-Degrading Species

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Ana C. Henriques, Paolo De Marco

May/June 2015 Volume 3 Issue 3

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Abigail Lenz, Jeffrey Tomkins, Andrew J. Fabich

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Complete Genome Sequence of Mycoplasma meleagridis, a Possible Emerging Pathogen in Chickens

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Celia Abolnik Draft Genome Sequences of Three Escherichia coli Strains with Different In Vivo Pathogenicities in an Avian (Ascending) Infection Model of the Oviduct

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Rikke Heidemann Olsen, Ida Cecilie Naundrup Thøfner, Susanne Elisabeth Pors, Henrik Christensen, Magne Bisgaard, Jens Peter Christensen e00421-15

Alexander L. Greninger, Ilya Chorny, Susan Knowles, Valerie L. Ng, Vishnu Chaturvedi Draft Genome Sequence of Norvancomycin-Producing Strain Amycolatopsis orientalis CPCC200066

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Xuan Lei, Fang Yuan, Yuanyuan Shi, Xingxing Li, Lifei Wang, Bin Hong Genome Sequences of 11 Shiga Toxin-Producing Escherichia coli Strains

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C. Gabrielsen, F. Drabløs, J. E. Afset Draft Whole-Genome Sequence of Lactobacillus fermentum LfQi6, Derived from the Human Microbiome

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Bobban Subhadra, Jill Krier, Karina Hofstee, Nicholas Monsul, Eva Berkes Draft Genome Sequence of Alicycliphilus sp. B1, an N-Acylhomoserine Lactone-Producing Bacterium, Isolated from Activated Sludge

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Noriya Okutsu, Tomohiro Morohoshi, Tsukasa Ikeda Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “Thermoanaerobacter cellulolyticus”

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Laura L. Lee, Javier A. Izquierdo, Sara E. Blumer-Schuette, Jeffrey V. Zurawski, Jonathan M. Conway, Robert W. Cottingham, Marcel Huntemann, Alex Copeland, I-Min A. Chen, Nikos Kyrpides, Victor Markowitz, Krishnaveni Palaniappan, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T. B. K. Reddy, Nicole Shapiro, Henrik P. Nordberg, Michael N. Cantor, Susan X. Hua, Tanja Woyke, Robert M. Kelly Draft Genome Sequence of Erythrobacter vulgaris Strain O1, a Glycosyl HydrolaseProducing Bacterium

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Amira Suriaty Yaakop, Chia Sing Chan, Ummirul Mukminin Kahar, Robson Ee, Kok-Gan Chan, Kian Mau Goh Complete Genome Assemblies for Two Single-Chromosome Vibrio cholerae Isolates, Strains 1154-74 (Serogroup O49) and 10432-62 (Serogroup O27)

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S. L. Johnson, A. Khiani, K. A. Bishop-Lilly, C. Chapman, M. Patel, K. Verratti, H. Teshima, A. C. Munk, D. C. Bruce, C. S. Han, G. Xie, K. W. Davenport, P. Chain, S. Sozhamannan Whole-Genome Sequence and Annotation of Octopine-Utilizing Pseudomonas kilonensis (Previously P. fluorescens) Strain 1855-344

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Wilhelm Wei Han Eng, Han Ming Gan, Huan You Gan, André O. Hudson, Michael A. Savka

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Draft Genome Sequences of Four NDM-1-Producing Klebsiella pneumoniae Strains from a Health Care Facility in Northern California

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequences of Two Clinical Isolates of Mycobacterium tuberculosis from Sputum of Kazakh Patients

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Ulykbek Kairov, Ulan Kozhamkulov, Askhat Molkenov, Saule Rakhimova, Ayken Askapuli, Maxat Zhabagin, Ainur Akhmetova, Dauren Yerezhepov, Zhannur Abilova, Aliya Abilmazhinova, Venera Bismilda, Leila Chingisova, Zhaxybay Zhumadilov, Ainur Akilzhanova Draft Genome Sequence of Oleiagrimonas soli 3.5XT, a Type Species in a Newly Identified Genus, Isolated from an Oil Field in China

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Draft Genome Sequences of Six Different Staphylococcus epidermidis Clones, Isolated Individually from Preterm Neonates Presenting with Sepsis at Edinburgh’s Royal Infirmary

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P. Walsh, M. Bekaert, J. Carroll, T. Manning, B. Kelly, A. O’Driscoll, X. Lu, C. Smith, P. Dickinson, K. Templeton, P. Ghazal, R. D. Sleator Draft Genome Sequence of Anaeromyxobacter sp. Strain PSR-1, an Arsenate-Respiring Bacterium Isolated from Arsenic-Contaminated Soil

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Mimori Tonomura, Ayaka Ehara, Haruo Suzuki, Seigo Amachi Draft Genome Sequence of the Thermophile Thermus filiformis ATCC 43280, Producer of Carotenoid-(Di)glucoside-Branched Fatty Acid (Di)esters and Source of Hyperthermostable Enzymes of Biotechnological Interest

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Fernanda Mandelli, Brenda Oliveira Ramires, Matthew Brian Couger, Douglas A. A. Paixão, Cesar M. Camilo, Igor Polikarpov, Rolf Prade, Diego M. Riaño-Pachón, Fabio M. Squina Whole-Genome Sequence of Aquamicrobium sp. Strain SK-2, a Polychlorinated BiphenylUtilizing Bacterium Isolated from Sewage Sludge

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Young-Cheol Chang, Ken Sawada, Eun-Sook Kim, Kweon Jung, Shintaro Kikuchi Draft Genome Sequence of Pantoea anthophila Strain 11-2 from Hypersaline Lake Laysan, Hawaii

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Xuehua Wan, Shaobin Hou, Nolwenn Phan, Jennifer S. Malone Moss, Stuart P. Donachie, Maqsudul Alam Draft Genome Sequence of Phenylobacterium immobile Strain E (DSM 1986), Isolated from Uncontaminated Soil in Ecuador

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Ondrej Reznicek, Francisca Luesken, Sandra J. Facey, Bernhard Hauer Draft Genome Sequence of Extensively Drug-Resistant Acinetobacter baumannii Strain CUAB1 from a Patient in Hong Kong, China

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Aldrin Kay-Yuen Yim, Jamie Sui-Lam Kwok, Allen Chi-Shing Yu, Alden King-Yung Leung, Hiuus Hiu-Yu Lau, Ting-Fung Chan, Margaret Ip, Stephen Kwok-Wing Tsui Genome Sequence of Bacillus thuringiensis Strain Btm27, an Egyptian Isolate Highly Toxic to Cotton Leafworm

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Brigida Rusconi, Yue Chen, Sara S. K. Koenig, Ehab R. El-Helow, Mark Eppinger Draft Genome Sequence of Burkholderia andropogonis Type Strain ICMP2807, Isolated from Sorghum bicolor

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Lucilene Lopes-Santos, Daniel Bedo Assumpção Castro, Laura Maria Mariscal Ottoboni, Duckchul Park, Bevan Simon Weir, Suzete Aparecida Lanza Destéfano May/June 2015 Volume 3 Issue 3

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Yong Huang, Tingting Fang, Hui Wang, Haiyan Zhou

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Staphylococcus carnosus subsp. utilis LTH 7013, Isolated from South Tyrolean Ham

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Anne Müller, Christopher Huptas, Mareike Wenning, Herbert Schmidt, Agnes Weiss Draft Genome Sequence of the Nonmarine Agarolytic Bacterium Cellvibrio sp. OA-2007

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Syazni, Mitsunori Yanagisawa, Masahiro Kasuu, Kiyohiko Nakasaki, Osamu Ariga Draft Genome Sequence of Pseudomonas abietaniphila KF701 (NBRC110664), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil

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Draft Genome Sequences of Five Legionella pneumophila Strains Isolated from Environmental Water Samples

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Kenta Watanabe, Haruo Suzuki, Ryo Nakao, Takashi Shimizu, Masahisa Watarai Draft Genome Sequence of Lactobacillus rhamnosus CLS17

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Samat S. Kozhakhmetov, Almagul R. Kushugulova, Saule A. Saduakhasova, Gulnara S. Shakhabayeva, Zhanagul R. Khassenbekova, Askhat B. Molkenov, Ulykbek E. Kairov, Raushan B. Issayeva, Talgat S. Nurgozhin, Zhaxybay S. Zhumadilov Complete Genome Sequence of Scardovia inopinata JCM 12537T, Isolated from Human Dental Caries

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Kenshiro Oshima, Jun-ichiro Hayashi, Hidehiro Toh, Akiyo Nakano, Emi Omori, Yasue Hattori, Hidetoshi Morita, Kenya Honda, Masahira Hattori Genome Sequence of the Electrogenic Petroleum-Degrading Thalassospira sp. Strain HJ

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Larisa Kiseleva, Sofya K. Garushyants, Justina Briliute, David J. W. Simpson, Michael F. Cohen, Igor Goryanin Complete Genome Sequence of Parascardovia denticolens JCM 12538T, Isolated from Human Dental Caries

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Kenshiro Oshima, Jun-ichiro Hayashi, Hidehiro Toh, Akiyo Nakano, Chie Shindo, Keiko Komiya, Hidetoshi Morita, Kenya Honda, Masahira Hattori Draft Genome Sequence of Methylobacterium radiotolerans, a DDE-Degrading and Plant Growth-Promoting Strain Isolated from Cucurbita pepo

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Nele Eevers, Jonathan D. Van Hamme, Eric M. Bottos, Nele Weyens, Jaco Vangronsveld Sphingomonas taxi, Isolated from Cucurbita pepo, Proves to Be a DDE-Degrading and Plant Growth-Promoting Strain

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Nele Eevers, Jonathan D. Van Hamme, Eric M. Bottos, Nele Weyens, Jaco Vangronsveld Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site

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Jayashree Ray, R. Jordan Waters, Jeffrey M. Skerker, Jennifer V. Kuehl, Morgan N. Price, Jiawen Huang, Romy Chakraborty, Adam P. Arkin, Adam Deutschbauer Draft Genome Sequences of 10 Microbacterium spp., with Emphasis on Heavy MetalContaminated Environments

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Erika Corretto, Livio Antonielli, Angela Sessitsch, Petra Kidd, Nele Weyens, Günter Brader

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Hidehiko Fujihara, Atsushi Yamazoe, Akira Hosoyama, Hikaru Suenaga, Nobutada Kimura, Jun Hirose, Takahito Watanabe, Taiki Futagami, Masatoshi Goto, Kensuke Furukawa

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Genome Sequence of Lactococcus lactis subsp. cremoris Mast36, a Strain Isolated from Bovine Mastitis

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Carme Plumed-Ferrer, Simona Gazzola, Cecilia Fontana, Daniela Bassi, Pier-Sandro Cocconcelli, Atte von Wright Genome Sequence of Mycoplasma meleagridis Type Strain 17529

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Elhem Yacoub, Pascal Sirand-Pugnet, Alain Blanchard, Boutheina Ben Abdelmoumen Mardassi e00486-15

Juan Pablo Rosas-Morales, Ximena Perez-Mancilla, Liliana López-Kleine, Dolly Montoya Castaño, Diego Mauricio Riaño-Pachón Draft Whole-Genome Sequence of Morganella morganii Serotype O:1ab

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John H. E. Nash, N. Martin Young Complete Genome Sequence of Streptococcus thermophilus SMQ-301, a Model Strain for Phage-Host Interactions

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Simon J. Labrie, Denise M. Tremblay, Pier-Luc Plante, Jessica Wasserscheid, Ken Dewar, Jacques Corbeil, Sylvain Moineau Genome Sequence of Anoxybacillus thermarum AF/04T, Isolated from the Euganean Hot Springs in Abano Terme, Italy

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Annarita Poli, Barbara Nicolaus, Kok-Gan Chan, Ummirul Mukminin Kahar, Chia Sing Chan, Kian Mau Goh Genome Sequence of Bacillus coagulans P38, an Efficient Polymer-Grade L-Lactate Producer from Cellulosic Substrates

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Lili Peng, Lifu Song, Lifan Sun, Yumeng Cai, Limin Wang, Bo Yu Draft Genome Sequence of a Sulfur-Oxidizing Autotroph, Sulfuricella sp. Strain T08, Isolated from a Freshwater Lake

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Tomohiro Watanabe, Hisaya Kojima, Manabu Fukui Draft Genome Sequence of a Papaverine-Degrading, Gram-positive Arthrobacter sp., Isolated from Soil Near Hohenheim, Germany

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Ondrej Reznicek, Sandra J. Facey, Bernhard Hauer Draft Genome Sequence of Chromobacterium vaccinii, a Potential Biocontrol Agent against Mosquito (Aedes aegypti) Larvae

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Kristin Vöing, Alisha Harrison, Scott D. Soby Draft Genome Sequence of Mycobacterium bovis Strain SP38, a Pathogenic Bacterium Isolated from a Bovine in Brazil

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Ana Marcia Sa Guimaraes, Cristina Kraemer Zimpel, Cássia Yumi Ikuta, Naíla Cannes do Nascimento, Andrea Pires dos Santos, Joanne Belle Messick, Marcos Bryan Heinemann, José Soares Ferreira Neto, Paulo Eduardo Brandão Genome Sequence of Leucobacter sp. 4J7B1, a Plant-Osmoprotectant Soil Microorganism

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M. Manzanera, J. I. Vílchez, C. García-Fontana, C. Calvo, J. González-López Genome Sequence of Cronobacter sakazakii Serogroup O:4, Sequence Type 4 Strain CDC 2009-03746, Isolated from a Fatal Case of Infantile Meningitis

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Christopher J. Grim, Gopal R. Gopinath, Karen G. Jarvis, Venugopal Sathyamoorthy, Larissa H. Trach, Hannah R. Chase, Ben D. Tall May/June 2015 Volume 3 Issue 3

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Draft Genome Sequences of Clostridium Strains Native to Colombia with the Potential To Produce Solvents

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

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Draft Genome Sequence of a Drug-Susceptible New Zealand Isolate of Mycobacterium tuberculosis Lineage 3 Micheál Mac Aogáin, James E. Bower, Indira Basu, Joshua T. Freeman, Ronan F. O’Toole

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Draft Genome Sequences of 18 Oral Streptococcus Strains That Encode Amylase-Binding Proteins Amarpreet Sabharwal, Yu-Chieh Liao, Hsin-Hung Lin, Elaine M. Haase, Frank A. Scannapieco

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Draft Genome Sequence of Jeotgalibacillus soli DSM 23228, a Bacterium Isolated from Alkaline Sandy Soil Kian Mau Goh, Kok-Gan Chan, Amira Suriaty Yaakop, Chia Sing Chan, Robson Ee, Wen-Si Tan, Han Ming Gan

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Draft Genome Sequence of New Leprosy Agent Mycobacterium lepromatosis Xiang Y. Han, Nipun A. Mistry, Erika J. Thompson, Hong-Li Tang, Kanhav Khanna, Li Zhang

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Draft Genome Sequence of Pseudomonas aeruginosa KF702 (NBRC 110665), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil Hidehiko Fujihara, Atsushi Yamazoe, Akira Hosoyama, Hikaru Suenaga, Nobutada Kimura, Jun Hirose, Takahito Watanabe, Taiki Futagami, Masatoshi Goto, Kensuke Furukawa

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Draft Genome Sequence of Aeromonas caviae 8LM, Isolated from Stool Culture of a Child with Diarrhea Bárbara Moriel, Leonardo M. Cruz, Cibelle B. Dallagassa, Helisson Faoro, Emanuel M. de Souza, Fábio O. Pedrosa, Fabiane G. M. Rego, Geraldo Picheth, Cyntia M. T. Fadel-Picheth

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Draft Genome Sequences of Corynebacterium kroppenstedtii CNM633/14 and CNM632/ 14, Multidrug-Resistant and Antibiotic-Sensitive Isolates from Nodules of Granulomatous Mastitis Patients Maria Isabel Fernández-Natal, Francisco Soriano, Jaime Ariza-Miguel, Teresa Marrodan-Ciordia, Alberto Acedo, Marta Hernandez, Andreas Tauch, David Rodríguez-Lázaro

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Draft Genome Sequence of Rhodococcus sp. Strain 311R Elham Ehsani, Ruy Jauregui, Robert Geffers, Michael Jareck, Nico Boon, Dietmar H. Pieper, Ramiro Vilchez-Vargas

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Genome Assemblies of Three Soil-Associated Devosia species: D. insulae, D. limi, and D. soli Yousef I. Hassan, Dion Lepp, Ting Zhou

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Complete Genome Sequence of Pseudomonas aeruginosa Strain 8380, Isolated from the Human Gut Yu-ki Ichise, Takehide Kosuge, Maki Uwate, Taiji Nakae, Hideaki Maseda

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Complete Genome Sequence of Linezolid-Susceptible Staphylococcus haemolyticus Sh29/ 312/L2, a Clonal Derivative of a Linezolid-Resistant Clinical Strain Lara M. de Almeida, Carlos Pires, Louise T. Cerdeira, Théo G. M. de Oliveira, John Anthony McCulloch, Paula Juliana Perez-Chaparro, Andrey G. Sacramento, Artemir C. Brito, Joás L. da Silva, Maria Rita E. de Araújo, Nilton Lincopan, Melissa J. Martin, Michael S. Gilmore, Elsa M. Mamizuka

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Catabacter hongkongensis Type Strain HKU16T, Isolated from a Patient with Bacteremia and Intestinal Obstruction

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Susanna K. P. Lau, Jade L. L. Teng, Yi Huang, Shirly O. T. Curreem, Stephen K. W. Tsui, Patrick C. Y. Woo Complete Genome Sequence of Bacillus subtilis Strain ATCC 6051a, a Potential Host for High-Level Secretion of Industrial Enzymes

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Haeyoung Jeong, Young Mi Sim, Seung-Hwan Park, Soo-Keun Choi Draft Genome Sequence of Bacillus sp. Strain CMAA 1185, a Cellullolytic Bacterium Isolated from Stain House Lake, Antarctic Peninsula

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Draft Genome Sequence of Enterohemorrhagic Escherichia coli O157 NCCP15739, Isolated in the Republic of Korea

e00522-15

Taesoo Kwon, Seung-Hak Cho Draft Genome Sequence of Aneurinibacillus tyrosinisolvens LL-002T, Which Possesses Some Pseudouridine Synthases

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Taishi Tsubouchi, Shinro Nishi, Tadashi Maruyama, Yuji Hatada Draft Genome Sequences of Three Capnocytophaga canimorsus Strains Isolated from Septic Patients

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Pablo Manfredi, Francesco Renzi, Guy R. Cornelis Draft Genome Sequences of Three Capnocytophaga canimorsus Strains Isolated from Healthy Canine Oral Cavities

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Pablo Manfredi, Francesco Renzi, Guy R. Cornelis Draft Genome Sequences of Three Capnocytophaga cynodegmi Strains Isolated from the Oral Cavity of Healthy Dogs

e00200-15

Pablo Manfredi, Francesco Renzi, Guy R. Cornelis Draft Genome Sequence of Vibrio sp. Strain Vb278, an Antagonistic Bacterium Isolated from the Marine Sponge Sarcotragus spinosulus

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Ana C. S. Gonçalves, Telma Franco, Gianmaria Califano, Scot E. Dowd, Georg Pohnert, Rodrigo Costa Whole-Genome Sequence of Serratia liquefaciens HUMV-21, a Cytotoxic, QuorumSensing, and Biofilm-Producing Clinical Isolate

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María Lázaro-Díez, Felix Acosta, Sara Remuzgo-Martínez, Alain Ocampo-Sosa, Javier Gonzalo Ocejo-Vinyals, Jimena Bravo, Fátima El Aamri, Oliver Escuela, Luis Martínez-Martínez, José Ramos-Vivas Genome Anatomy of Streptococcus parasanguinis Strain C1A, Isolated from a Patient with Acute Exacerbation of Chronic Obstructive Pulmonary Disease, Reveals Unusual Genomic Features

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Kok-Gan Chan, Kim Tien Ng, Yong Kek Pang, Teik Min Chong, Adeeba Kamarulzaman, Wai-Fong Yin, Kok Keng Tee Complete Genome Sequence of Sulfolobus solfataricus Strain 98/2 and Evolved Derivatives

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Samuel McCarthy, Julien Gradnigo, Tyler Johnson, Sophie Payne, Anna Lipzen, Joel Martin, Wendy Schackwitz, Etsuko Moriyama, Paul Blum May/June 2015 Volume 3 Issue 3

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Suikinai Nobre Santos, Vanessa Nessner Kavamura, Rodrigo Gouvêa Taketani, Rafael L. F. Vasconcellos, Tiago Domingues Zucchi, Itamar Soares Melo

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Genome Sequence of Lactobacillus curieae CCTCC M 2011381T, a Novel Producer of Gamma-aminobutyric Acid

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Ying Wang, Yu Wang, Chong Lang, Dongzhi Wei, Ping Xu, Jingli Xie Complete Genome Sequence of Listeria monocytogenes N2306, a Strain Associated with the 2013-2014 Listeriosis Outbreak in Switzerland

e00553-15

Taurai Tasara, Rebecca Ebner, Jochen Klumpp, Roger Stephan Complete Genome Sequence of an Evolved Thermotoga maritima Isolate

e00557-15

Complete Genome Sequence of Uropathogenic Escherichia coli Strain CI5

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Kurosh S. Mehershahi, Soman N. Abraham, Swaine L. Chen Complete Genome Sequence of Mycoplasma synoviae Strain WVU 1853T

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Meghan A. May, Gerald F. Kutish, Anthony F. Barbet, Dina L. Michaels, Daniel R. Brown Pandoraea sp. Strain E26: Discovery of Its Quorum-Sensing Properties via WholeGenome Sequence Analysis

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Kok-Gan Chan, Wai-Fong Yin, Kok Keng Tee, Chien-Yi Chang, Kumutha Priya Draft Genome Sequence of Isoproturon-Mineralizing Sphingomonas sp. SRS2, Isolated from an Agricultural Field in the United Kingdom

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Tue Kjærgaard Nielsen, Sebastian R. Sørensen, Lars Hestbjerg Hansen Draft Genome Sequence of 24570, the Type Strain of Shigella flexneri

e00393-15

Kate S. Baker, Julian Parkhill, Nicholas R. Thomson Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples

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Patricio Jeraldo, Álvaro Hernández, Bryan A. White, Daniel O’Brien, David Ahlquist, Lisa Boardman, Nicholas Chia Draft Genome Sequence of Mycobacterium chelonae Type Strain ATCC 35752

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Nabeeh A. Hasan, Rebecca M. Davidson, Vinicius Calado Nogueira de Moura, Benjamin J. Garcia, Paul R. Reynolds, L. Elaine Epperson, Eveline Farias-Hesson, Mary Ann DeGroote, Mary Jackson, Michael Strong Complete Genome Sequence of Microcystis aeruginosa NIES-2549, a Bloom-Forming Cyanobacterium from Lake Kasumigaura, Japan

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Haruyo Yamaguchi, Shigekatsu Suzuki, Yuuhiko Tanabe, Yasunori Osana, Yohei Shimura, Ken-ichiro Ishida, Masanobu Kawachi Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low GⴙC Content of Chromosomal DNA

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Christian Rückert, Andreas Albersmeier, Anika Winkler, Andreas Tauch Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis

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Christian Rückert, Andreas Albersmeier, Anika Winkler, Andreas Tauch

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May/June 2015 Volume 3 Issue 3

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Raghuveer Singh, Julien Gradnigo, Derrick White, Anna Lipzen, Joel Martin, Wendy Schackwitz, Etsuko Moriyama, Paul Blum

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genomes of Gammaproteobacterial Methanotrophs Isolated from Terrestrial Ecosystems

e00515-15

Richard Hamilton, K. Dimitri Kits, Victoria A. Ramonovskaya, Olga N. Rozova, Hiroya Yurimoto, Hiroyuki Iguchi, Valentina N. Khmelenina, Yasuyoshi Sakai, Peter F. Dunfield, Martin G. Klotz, Claudia Knief, Huub J. M. Op den Camp, Mike S. M. Jetten, Françoise Bringel, Stéphane Vuilleumier, Mette M. Svenning, Nicole Shapiro, Tanja Woyke, Yuri A. Trotsenko, Lisa Y. Stein, Marina G. Kalyuzhnaya Draft Genome Sequence of Pseudomonas syringae pv. persicae NCPPB 2254

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Draft Whole-Genome Sequences of 10 Enterotoxigenic Escherichia coli Serogroup O6 Strains

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Vaishnavi Pattabiraman, Cheryl A. Bopp Complete Genome Sequence of Agrobacterium tumefaciens Ach5

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Ya-Yi Huang, Shu-Ting Cho, Wen-Sui Lo, Yi-Chieh Wang, Erh-Min Lai, Chih-Horng Kuo Draft Genome Sequence of Human-Pathogenic Lactococcus garvieae LG-ilsanpaikgs201105 That Caused Acute Acalculous Cholecystitis

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Ji Hyung Kim, Do-Hyung Kang, Se Chang Park Genome Sequence of Photobacterium halotolerans MELD1, with Mercury Reductase (merA), Isolated from Phragmites australis

e00530-15

Dony Chacko Mathew, Gincy Marina Mathew, Ronnie Gicaraya Gicana, Chieh-Chen Huang Draft Genome Sequence of a Halorubrum H3 Strain Isolated from the Burlinskoye Salt Lake (Altai Krai, Russia)

e00566-15

Aleksey S. Rozanov, Alla V. Bryanskaya, Tatiana K. Malup, Anastasia V. Kotenko, Sergey E. Peltek Draft Genome Sequence of Mycobacterium tuberculosis Strain MT11, Which Represents a New Lineage

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Djaltou Aboubaker Osman, Michael Phelippeau, Didier Musso, Catherine Robert, Caroline Michelle, Olivier Croce, Michel Drancourt Draft Genome Sequence of Mycobacterium tuberculosis Strain MT43, a Representative of the Manu2 Genotype

e00579-15

Djaltou Aboubaker Osman, Michael Phelippeau, Didier Musso, Catherine Robert, Caroline Michelle, Olivier Croce, Michel Drancourt Draft Genome Sequence of Staphylococcus gallinarum DSM 20610T, Originally Isolated from the Skin of a Chicken

e00580-15

Ding Shi, Daiqiong Fang, Xinjun Hu, Ang Li, Longxian Lv, Jing Guo, Yanfei Chen, Wenrui Wu, Feifei Guo, Lanjuan Li Genome Sequence of the Potato Plant Pathogen Dickeya dianthicola Strain RNS04.9

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Yannick Raoul des Essarts, Samuel Mondy, Valérie Hélias, Denis Faure Draft Genome Sequence of Thermoanaerobacter sp. Strain YS13, a Novel Thermophilic Bacterium

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Tingting Peng, Siyi Pan, Lew Christopher, Richard Sparling, David B. Levin

May/June 2015 Volume 3 Issue 3

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Wenjun Zhao, Hongshan Jiang, Qian Tian, Jie Hu

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Aliivibrio fischeri Strain 5LC, a Bacterium Retrieved from Gilthead Sea Bream (Sparus aurata) Larvae Reared in Aquaculture

e00593-15

Gianmaria Califano, Telma Franco, Ana C. S. Gonçalves, Sara Castanho, Florbela Soares, Laura Ribeiro, Leonardo Mata, Rodrigo Costa Draft Genome Sequences of Pseudomonas aeruginosa Strain PS3 and Citrobacter freundii Strain SA79 Obtained from a Wound Dressing-Associated Biofilm

e00561-15

Sirwan Akbar, Simon P. Rout, Paul N. Humphreys Draft Genome Sequence of the Toluene-Degrading Pseudomonas stutzeri Strain ST-9

e00567-15

Draft Genome Sequence of Rice Endophyte-Associated Isolate Kosakonia oryzae KO348

e00594-15

Xianfa Meng, Iris Bertani, Pamela Abbruscato, Pietro Piffanelli, Danilo Licastro, Changhai Wang, Vittorio Venturi Draft Genome Sequences of Two Protease-Producing Strains of Arsukibacterium, Isolated from Two Cold and Alkaline Environments

e00585-15

Jeanette E. Lylloff, Lea B. S. Hansen, Morten Jepsen, Peter F. Hallin, Søren J. Sørensen, Peter Stougaard, Mikkel A. Glaring Draft Genome Sequence of Hydrocarbon-Degrading Pseudomonas putida Strain KG-4, Isolated from Soil Samples Collected from Krishna-Godavari Basin in India

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Chhavi Dawar, Ramesh K. Aggarwal Genome Sequence of Anoxybacillus flavithermus Strain AK1, a Thermophile Isolated from a Hot Spring in Saudi Arabia

e00604-15

Amjad Khalil, Neelamegam Sivakumar, Sami Qarawi Draft Genome Sequence of Erwinia tracheiphila, an Economically Important Bacterial Pathogen of Cucurbits

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Lori R. Shapiro, Erin D. Scully, Dana Roberts, Timothy J. Straub, Scott M. Geib, Jihye Park, Andrew G. Stephenson, Erika Salaau Rojas, Quin Liu, Gwyn Beattie, Mark Gleason, Consuelo M. De Moraes, Mark C. Mescher, Shelby G. Fleischer, Roberto Kolter, Naomi Pierce, Olga Zhaxybayeva Draft Genome Sequence of the Bacterium Lysobacter capsici X2-3, with a Broad Spectrum of Antimicrobial Activity against Multiple Plant-Pathogenic Microbes

e00589-15

Jing-Li Yi, Jing Wang, Qun Li, Zhao-xia Liu, Li Zhang, Ai-Xin Liu, Jin-Feng Yu Genome Sequence of Rhodococcus sp. 4J2A2, a Desiccation-Tolerant Bacterium Involved in Biodegradation of Aromatic Hydrocarbons

e00592-15

Maximino Manzanera, Cristina García-Fontana, Juan Ignacio Vílchez, Jesús González-López Draft Genome Sequence of Triclosan-Degrading Bacterium Sphingomonas sp. Strain YLJM2C, Isolated from a Wastewater Treatment Plant in China

e00603-15

Sikandar I. Mulla, Anyi Hu, Haili Xu, Chang-Ping Yu Draft Genome Sequence of the Biowarfare Simulant Bacillus atrophaeus Strain 930029

e00491-15

Catherine Eng, Yann Blouin, Nicolas Ding, Guilhem Larigauderie, Vincent Ramisse, Céline Pujol

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Margarita Gomila, Antonio Busquets, Elena García-Valdés, Esti Michael, Rivka Cahan, Yeshayahu Nitzan, Jorge Lalucat

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Burkholderia sp. MR1, a Methylarsenate-Reducing Bacterial Isolate from Florida Golf Course Soil

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Shashank S. Pawitwar, Sagar M. Utturkar, Steven D. Brown, Masafumi Yoshinaga, Barry P. Rosen Draft Genome Sequences of Clinical Daptomycin-Nonsusceptible Methicillin-Resistant Staphylococcus aureus Strain APS211 and Its Daptomycin-Susceptible Progenitor APS210

e00568-15

David R. Cameron, Jhih-Hang Jiang, Iain J. Abbott, Denis W. Spelman, Anton Y. Peleg Genome Sequence of Anoxybacillus geothermalis Strain GSsed3, a Novel Thermophilic Endospore-Forming Species

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Complete Genome Sequence of Burkholderia cepacia Strain LO6

e00587-15

Mahdi Belcaid, Yun Kang, Apichai Tuanyok, Tung T. Hoang Draft Genome Sequence of Paenibacillus sp. Strain DMB20, Isolated from Alang ShipBreaking Yard, Which Harbors Genes for Xenobiotic Degradation

e00554-15

Binal Shah, Kunal Jain, Namrata Patel, Ramesh Pandit, Anand Patel, Chaitanya G. Joshi, Datta Madamwar Draft Genome Sequence of Raoultella terrigena R1Gly, a Diazotrophic Endophyte

e00607-15

M. Schicklberger, N. Shapiro, D. Loqué, T. Woyke, R. Chakraborty Draft Genome Sequence of Stenotrophomonas maltophilia Strain UV74 Reveals Extensive Variability within Its Genomic Group

e00611-15

Oscar Conchillo-Solé, Daniel Yero, Xavier Coves, Pol Huedo, Sònia Martínez-Servat, Xavier Daura, Isidre Gibert Draft Genome Sequence of Mycobacterium obuense Strain UC1, Isolated from Patient Sputum

e00612-15

Alexander L. Greninger, Gail Cunningham, Elaine D. Hsu, Joanna M. Yu, Charles Y. Chiu, Steve Miller Genome Sequence of Lactobacillus rhamnosus Strain CNCM I-3698

e00582-15

R. Tareb, M. Bernardeau, J. P. Vernoux Draft Genome Sequences of Two Streptococcus pneumoniae Serotype 19F Sequence Type 271 Clinical Isolates with Low- and High-Level Cefotaxime Resistance

e00605-15

Margaret Ip, Helen Ma, Carmen Li, Stephen Tsui, Haokui Zhou Metagenome Sequencing Reveals Rhodococcus Dominance in Farpuk Cave, Mizoram, India, an Eastern Himalayan Biodiversity Hot Spot Region

e00610-15

Surajit De Mandal, Zothan Sanga, Nachimuthu Senthil Kumar Complete Genome Sequence of Pseudoxanthomonas suwonensis Strain J1, a CelluloseDegrading Bacterium Isolated from Leaf- and Wood-Enriched Soil

e00614-15

Liyuan Hou, Jingwei Jiang, Zhihui Xu, Yun Zhou, Frederick Chi-Ching Leung Complete Genome Sequence of the Cyanogenic Phosphate-Solubilizing Pseudomonas sp. Strain CCOS 191, a Close Relative of Pseudomonas mosselii

e00616-15

Theo H. M. Smits, Joël F. Pothier, Michela Ruinelli, Jochen Blom, David Frasson, Chantal Koechli, Carlotta Fabbri, Helmut Brandl, Brion Duffy, Martin Sievers May/June 2015 Volume 3 Issue 3

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Sevasti Filippidou, Marion Jaussi, Thomas Junier, Tina Wunderlin, Ludovic Roussel-Delif, Nicole Jeanneret, Andrea Vieth-Hillebrand, Alexandra Vetter, Simona Regenspurg, Shannon L. Johnson, Kim McMurry, Cheryl D. Gleasner, Chien-Chi Lo, Paul Li, Momchilo Vuyisich, Patrick S. Chain, Pilar Junier

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequences of Escherichia coli O157:H7 Strains Rafaela_II (Clade 8) and 7.1_Anguil (Clade 6) from Cattle in Argentina

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Ariel Fernando Amadio, Natalia Amigo, Andrea Fabiana Puebla, Marisa Diana Farber, Angel Adrián Cataldi Genome Sequence of an Indigoid-Producing Strain, Pseudomonas sp. PI1

e00622-15

Yuanyuan Qu, Ziyan Liu, Wenli Shen, Shuzhen Li, Hongzhi Tang, Ping Xu Complete Genome Sequence of the Linear Plasmid pJD12 Hosted by Micrococcus sp. D12, Isolated from a High-Altitude Volcanic Lake in Argentina

e00627-15

Complete Genome Sequence of Listeria monocytogenes Strain DPC6895, a Serotype 1/2b Isolate from Bovine Raw Milk

e00629-15

Aidan Casey, Olivia McAuliffe, Aidan Coffey, Karen Hunt, Seamus Fanning, Edward Fox, Kieran Jordan Draft Genome Sequence of Mycobacterium arupense Strain GUC1

e00630-15

Alexander L. Greninger, Gail Cunningham, Joanna M. Yu, Elaine D. Hsu, Charles Y. Chiu, Steve Miller Genome Sequence of Listeria monocytogenes Strain HPB5415, Collected during a 2008 Listeriosis Outbreak in Canada

e00637-15

Arthur W. Pightling, Franco Pagotto Draft Genome Sequence of Pseudomonas psychrophila MTCC 12324, Isolated from the Arctic at 79°N

e00578-15

Wilson Peter Abraham, Sabu Thomas Complete Genome Sequence of the Bacterium Aalborg_AAW-1, Representing a Novel Family within the Candidate Phylum SR1

e00624-15

Morten Simonsen Dueholm, Mads Albertsen, Mikkel Stokholm-Bjerregaard, Simon J. McIlroy, Søren M. Karst, Per Halkjær Nielsen Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source

e00640-15

Erik M. Quandt, Ryan M. Summers, Mani V. Subramanian, Jeffrey E. Barrick Draft Genome Sequence of Gerbil-Adapted Carcinogenic Helicobacter pylori Strain 7.13

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Mohammad Asim, Surendra K. Chikara, Arpita Ghosh, Srinivas Vudathala, Judith Romero-Gallo, Uma S. Krishna, Keith T. Wilson, Dawn A. Israel, Richard M. Peek, Jr., Rupesh Chaturvedi Draft Genome Sequence of Microbacterium profundi Shh49T, an Actinobacterium Isolated from Deep-Sea Sediment of a Polymetallic Nodule Environment

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Yue-Hong Wu, Peng Zhou, Hong Cheng, Chun-Sheng Wang, Min Wu, Xue-Wei Xu Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki

e00644-15

Christine E. Sharp, Angela V. Smirnova, Marina G. Kalyuzhnaya, Françoise Bringel, Hisako Hirayama, Mike S. M. Jetten, Valentina N. Khmelenina, Martin G. Klotz, Claudia Knief, Nikos Kyrpides, Huub J. M. Op den Camp, Alexander S. Reshetnikov, Yasuyoshi Sakai, Nicole Shapiro, Yuri A. Trotsenko, Stéphane Vuilleumier, Tanja Woyke, Peter F. Dunfield xiv genomea.asm.org

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Julian Rafael Dib, Angel Angelov, Wolfgang Liebl, Johannes Döbber, Sonja Voget, Jörg Schuldes, Marta Gorriti, Maria Eugenia Farías, Friedhelm Meinhardt, Rolf Daniel

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Genome Sequence of Arthrobacter koreensis 5J12A, a Plant Growth-Promoting and Desiccation-Tolerant Strain

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Maximino Manzanera, Juan Jesús Narváez-Reinaldo, Cristina García-Fontana, Juan Ignacio Vílchez, Jesús González-López Draft Genome Sequence of Antimicrobial-Producing Clostridium sp. JC272, Isolated from Marine Sediment

e00650-15

L. Tushar, T. S. Sasi Jyothsna, C. Sasikala, C. V. Ramana Complete Genome Sequence of Bordetella pertussis D420

e00657-15

Draft Genome Sequence of Tannerella forsythia Type Strain ATCC 43037

e00660-15

Valentin Friedrich, Stephan Pabinger, Tsute Chen, Paul Messner, Floyd E. Dewhirst, Christina Schäffer Draft Genome Sequence of the First Human Isolate of the Ruminant Pathogen Mycoplasma capricolum subsp. capricolum

e00583-15

Frederik Valeur Seersholm, Anne Fischer, Martin Heller, Joerg Jores, Konrad Sachse, Tobias Mourier, Anders Johannes Hansen Draft Genome Sequence of Gluconobacter oxydans NL71, a Strain That Efficiently Biocatalyzes Xylose to Xylonic Acid at a High Concentration

e00615-15

Yuanyuan Miao, Xin Zhou, Yong Xu, Shiyuan Yu Draft Genome Sequence of Bacillus coagulans NL01, a Wonderful L-Lactic Acid Producer

e00635-15

Zhaojuan Zheng, Ting Jiang, Xi Lin, Jie Zhou, Jia Ouyang Draft Genome Sequences of Bacillus anthracis Strains Stored for Several Decades in Japan

e00633-15

Akiko Okutani, Makoto Osaki, Daisuke Takamatsu, Yoshihiro Kaku, Satoshi Inoue, Shigeru Morikawa Draft Genome Sequence of Comamonas sp. Strain E6 (NBRC 107749), a Degrader of Phthalate Isomers through the Protocatechuate 4,5-Cleavage Pathway

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Jun Shimodaira, Naofumi Kamimura, Akira Hosoyama, Atsushi Yamazoe, Nobuyuki Fujita, Eiji Masai Genome Sequence of the Alkaline-Tolerant Cellulomonas sp. Strain FA1

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Michael F. Cohen, Ping Hu, My Vu Nguyen, Nina Kamennaya, Natasha Brown, Tanja Woyke, Nikos Kyrpides, Hoi-Ying Holman, Tamas Torok Genome Sequence of a Klebsiella pneumoniae Sequence Type 258 Isolate with ProphageEncoded K. pneumoniae Carbapenemase

e00659-15

Liang Chen, Kalyan D. Chavda, Frank R. DeLeo, Kendall A. Bryant, Michael R. Jacobs, Robert A. Bonomo, Barry N. Kreiswirth Genome Sequence of Rhizobacterium Serratia marcescens Strain 90-166, Which Triggers Induced Systemic Resistance and Plant Growth Promotion

e00667-15

Haeyoung Jeong, Joseph W. Kloepper, Choong-Min Ryu Draft Genome Sequence of the Putrescine-Producing Strain Lactococcus lactis subsp. lactis 1AA59

e00669-15

Victor Ladero, Beatriz del Rio, Daniel M. Linares, María Fernandez, Baltasar Mayo, M. Cruz Martín, Miguel A. Alvarez

May/June 2015 Volume 3 Issue 3

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Christine J. Boinett, Simon R. Harris, Gemma C. Langridge, Elizabeth A. Trainor, Tod J. Merkel, Julian Parkhill

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Draft Genome Sequence of Shewanella sp. ECSMB14102, a Mussel RecruitmentPromoting Bacterium Isolated from the East China Sea

e00670-15

Jin-Long Yang, Xing-Pan Guo, Yu-Ru Chen, Wei Gao, De-Wen Ding Complete Genome Sequence of Sedimenticola thiotaurini Strain SIP-G1, a Polyphosphate- and Polyhydroxyalkanoate-Accumulating Sulfur-Oxidizing Gammaproteobacterium Isolated from Salt Marsh Sediments

e00671-15

Beverly E. Flood, Daniel S. Jones, Jake V. Bailey e00672-15

Tony Gutierrez, William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Manoj Pillay, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T. B. K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype

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Edmundo Calva, Claudia Silva, Mussaret B. Zaidi, Alejandro Sanchez-Flores, Karel Estrada, Genivaldo G. Z. Silva, Luz M. Soto-Jiménez, Magdalena Wiesner, Marcos Fernández-Mora, Robert A. Edwards, Pablo Vinuesa Genome Sequences of Pseudomonas amygdali pv. tabaci Strain ATCC 11528 and pv. lachrymans Strain 98A-744

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Haeyoung Jeong, Joseph W. Kloepper, Choong-Min Ryu Genome Sequence of the Soil Bacterium Janthinobacterium sp. KBS0711

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William R. Shoemaker, Mario E. Muscarella, Jay T. Lennon Complete Genome Sequences of Field Isolates of Mycobacterium bovis and Mycobacterium caprae

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José de la Fuente, Iratxe Díez-Delgado, Marinela Contreras, Joaquín Vicente, Alejandro Cabezas-Cruz, Marina Manrique, Raquel Tobes, Vladimir López, Beatriz Romero, Lucas Domínguez, Joseba M. Garrido, Ramón Juste, Christian Gortazar Complete Genome Sequence of Leptospira interrogans Serovar Bratislava, Strain PigK151

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David P. Alt, Jennifer H. Wilson-Welder, Darrell O. Bayles, Caroline Cameron, Ben Adler, Dieter M. Bulach, Torsten Seemann, Michael J. Lehane, Lee R. Haines, Alistair C. Darby, Neil Hall, Alan D. Radford, Richard L. Zuerner Complete Genome Sequence of Elizabethkingia meningoseptica, Isolated from a T-Cell Non-Hodgkin’s Lymphoma Patient

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Guiqin Sun, Lei Wang, Celimuge Bao, Tiansheng Li, Lili Ma, Li Chen Complete Genome Sequence of Edwardsiella tarda Isolate FL95-01, Recovered from Channel Catfish

e00682-15

Stephen R. Reichley, Geoffrey C. Waldbieser, Hasan C. Tekedar, Mark L. Lawrence, Matt J. Griffin Draft Genome Sequence of the Streptococcus pneumoniae Avery Strain A66

e00697-15

Christoph Hahn, Ewan M. Harrison, Julian Parkhill, Mark A. Holmes, Gavin K. Paterson

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Genome Sequence of Porticoccus hydrocarbonoclasticus Strain MCTG13d, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Whole-Genome Sequences of 15 Strains of Staphylococcus aureus subsp. aureus Isolated from Foodstuff and Human Clinical Samples

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Julien Crovadore, Gautier Calmin, Jenna Tonacini, Romain Chablais, Andreas Baumgartner, Bruno Schnyder, Elisabeth Hodille, François Lefort Whole-Genome Sequencing of Brevundimonas diminuta XGC1, Isolated from a Tuberculosis Patient in Gujarat, India

e00686-15

Draft Genome Sequence of Mycobacterium elephantis Strain Lipa

e00691-15

Alexander L. Greninger, Gail Cunningham, Joanna M. Yu, Elaine D. Hsu, Charles Y. Chiu, Steve Miller Draft Genome Sequence of Lactobacillus delbrueckii subsp. bulgaricus CRL871, a FolateProducing Strain Isolated from a Northwestern Argentinian Yogurt

e00693-15

Jonathan Emiliano Laiño, Elvira María Hebert, Graciela Savoy de Giori, Jean Guy LeBlanc Draft Genome Sequences of Two Toxigenic Corynebacterium ulcerans Strains

e00699-15

Marc-Christian Domingo, Eric Fournier, Cynthia Massé, Hugues Charest, Kathryn Bernard, Jean-Charles Côté, Cécile Tremblay Draft Genome Sequence of Streptacidiphilus oryzae TH49T, an Acidophilic Actinobacterium Isolated from Soil

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Yu Ri Kim, Sewook Park, Tae-Su Kim, Min-Kyeong Kim, Ji-Hye Han, Yochan Joung, Seung Bum Kim VIRUSES Complete Genome Sequences of Chikungunya Virus Strains Isolated in Mexico: First Detection of Imported and Autochthonous Cases

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José Alberto Díaz-Quiñonez, Joanna Ortiz-Alcántara, David Esaú Fragoso-Fonseca, Fabiola Garcés-Ayala, Noé Escobar-Escamilla, Mauricio Vázquez-Pichardo, Alma Núñez-León, María de la Luz Torres-Rodríguez, Belem Torres-Longoria, Irma López-Martínez, Cuitláhuac Ruíz-Matus, Pablo Kuri-Morales, José Ernesto Ramírez-González Complete Genome Sequence of a Lineage I Peste des Petits Ruminants Virus Isolated in 1969 in West Africa

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William G. Dundon, Daojin Yu, Modou Moustapha Lô, Angelika Loitsch, Mariame Diop, Adama Diallo Complete Genome Sequence of Canine Papillomavirus Type 16

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Jennifer Luff, Michelle Mader, Monica Britton, Joseph Fass, Peter Rowland, Carolyn Orr, Richard Schlegel, Hang Yuan Complete Genome Sequence of Bacillus megaterium Podophage Palmer

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Emily C. Hargrove, Mariana S. Lopez, Adriana C. Hernandez, Gabriel F. Kuty Everett Full-Genome Sequence of Pantropic Canine Coronavirus

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Nicola Decaro, Viviana Mari, Giulia Dowgier, Gabriella Elia, Gianvito Lanave, Maria Loredana Colaianni, Canio Buonavoglia

May/June 2015 Volume 3 Issue 3

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Arpita Ghosh, Khyati Chandratre, Abhinav Chaudhary, Spandan Chaudhary, Namrata Badani, Pooja S. Chaudhary, Dipali Dhawan, Srinivas Vudathala, Surendra K. Chikara

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

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Genome Sequence of Salmonella enterica Phage Det7 Sherwood R. Casjens, Deborah Jacobs-Sera, Graham F. Hatfull, Roger W. Hendrix

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Complete Genome Sequence of Porcine Circovirus Strain 102 with a Novel Mutation, Isolated from Hunan Province, China Zhe Zhu, Naidong Wang, Yang Zhan, Zhanfeng Wang, Aibing Wang, Zhibang Deng, Yi Yang

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Complete Genome Sequence of a Carnation Mottle Virus Infecting Hop Plants Yeonhwa Jo, Hoseong Choi, Won Kyong Cho

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Full-Length Coding Sequences for 12 Bovine Viral Diarrhea Virus Isolates from Persistently Infected Cattle in a Feedyard in Kansas Aspen M. Workman, Gregory P. Harhay, Michael P. Heaton, Dale M. Grotelueschen, David Sjeklocha, Timothy P. L. Smith

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De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome Yeonhwa Jo, Hoseong Choi, Ju-Yeon Yoon, Seung-Kook Choi, Won Kyong Cho

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Complete Genome Sequence of a Pathogenic Genotype 1 Subtype 3 Porcine Reproductive and Respiratory Syndrome Virus (Strain SU1-Bel) from Pig Primary Tissue Zen H. Lu, Alison D. Wilson, Xinglong Wang, Jean-Pierre Frossard, Tomasz Stadejek, Alan L. Archibald, Tahar Ait-Ali

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Near-Full-Length Genome Sequence of a Novel Reovirus from the Chinese Mitten Crab, Eriocheir sinensis Huaishun Shen, Yuanchao Ma, Yacheng Hu

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Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus from a Novel Outbreak in Belgium, January 2015 Sebastiaan Theuns, Nádia Conceição-Neto, Isaura Christiaens, Mark Zeller, Lowiese M. B. Desmarets, Inge D. M. Roukaerts, Delphine D. Acar, Elisabeth Heylen, Jelle Matthijnssens, Hans J. Nauwynck

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De Novo Genome Assembly of Ryegrass Mosaic Virus from a Ryegrass Transcriptome Yeonhwa Jo, Hoseong Choi, Won Kyong Cho

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Novel HIV-1 Recombinant Identified in a Foreign Heterosexual Resident in Japan: Relatedness to Recently Reported CRF69_01B, Detected Primarily among Japanese Men Who Have Sex with Men Shigeru Kusagawa, Yuko Yokota, Masayoshi Negishi, Makiko Kondo, Tetsuro Matano, Shingo Kato, Yutaka Takebe

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Genome Sequence of an Alphabaculovirus Isolated from the Oak Looper, Lambdina fiscellaria, Contains a Putative 2-Kilobase-Pair Transposable Element Encoding a Transposase and a FLYWCH Domain-Containing Protein George F. Rohrmann, Martin A. Erlandson, David A. Theilmann

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Whole-Genome Sequence of a Novel Hantavirus Isolated from the European Mole (Talpa europaea) Se Hun Gu, Janusz Hejduk, Janusz Markowski, Marcin Markowski, Paweł P. Liberski, Richard Yanagihara

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First Complete Genome Sequence of an Emerging Cucumber Green Mottle Mosaic Virus Isolate in North America Rugang Li, Yi Zheng, Zhangjun Fei, Kai-Shu Ling

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Genome Sequence of Banana Streak MY Virus from the Pacific Ocean Island of Tonga

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Daisy Stainton, Mana’ia Halafihi, David A. Collings, Arvind Varsani Complete Genome Sequence of a Novel Circovirus from Zebra Finch

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Monika Rinder, Anna Schmitz, Andrea Peschel, Rüdiger Korbel Complete Genome Sequence of a Classical Swine Fever Virus Isolate Belonging to a New Subgenotype, 2.1c, from Guangxi Province, China

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Complete Genome Sequence of Rat Cytomegalovirus Strain ALL-03 (Malaysian Strain)

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Krishnan Nair Balakrishnan, Ashwaq Ahmed Abdullah, Siti Nazrina Camalxaman, Yi Wan Quah, Yusuf Abba, Homayoun Hani, Hwei San Loh, Farina Mustaffa Kamal, Nazariah Allaudin Zeenathul, Ideris Aini, A. R. Omar, Mohamed Mustapha Noordin, Mohd Lila Mohd Azmi Complete Genome Sequence of a Porcine Epidemic Diarrhea S Gene Indel Strain Isolated in France in December 2014

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Béatrice Grasland, Lionel Bigault, Cécilia Bernard, Hélène Quenault, Olivier Toulouse, Christelle Fablet, Nicolas Rose, Fabrice Touzain, Yannick Blanchard Complete Genome Sequence of a Fish Nervous Necrosis Virus Isolated from Sea Perch (Lateolabrax japonicus) in China

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Peng Jia, Kun-Tong Jia, Mei-Sheng Yi Genomic Sequences of Five Helicoverpa armigera Nucleopolyhedrovirus Genotypes from Spain That Differ in Their Insecticidal Properties

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Maite Arrizubieta, Oihane Simón, Trevor Williams, Primitivo Caballero Genomic Analysis of Broad-Host-Range Enterobacteriophage Av-05

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Luis Amarillas, Osvaldo López-Cuevas, Josefina León-Félix, Nohelia Castro-del Campo, Charles P. Gerba, Cristóbal Chaidez Complete Genome Sequence of a Highly Pathogenic Avian Influenza Virus (H5N2) Associated with an Outbreak in Commercial Chickens, Iowa, USA, 2015

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Travis Clement, Gerald F. Kutish, Jill Nezworski, Joy Scaria, Eric Nelson, Jane Christopher-Hennings, Diego G. Diel Complete Genome Sequence of a Porcine Endogenous Retrovirus Isolated from a Bama Minipig in Guangxi, Southern China

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Hai-bo Tang, Kang Ouyang, Ling Ma, Anbin Bai, Shaomin Qin, Fenglian Chen, Jun Lin, Yinyin Cao, Jianmin Wu Complete Genome Sequence of a Bovine Viral Diarrhea Virus Subgenotype 1e Strain Isolated in Switzerland

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Hanspeter Stalder, Matthias Schweizer, Claudia Bachofen Complete Genome Sequences of Four European Subtype Strains of Tick-Borne Encephalitis Virus from Eastern Siberia, Russia

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Renat V. Adelshin, Olga V. Melnikova, Ludmila S. Karan, Evgeny I. Andaev, Sergey V. Balakhonov

May/June 2015 Volume 3 Issue 3

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Weixing Shao, Yaohua Huang, Shuang Liu, Faxing Wu, Zhi Zhang, Yaqin Dong, Xiaocheng Li

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

Molecular Characterization of the First Ebola Virus Isolated in Italy, from a Health Care Worker Repatriated from Sierra Leone

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Concetta Castilletti, Fabrizio Carletti, Cesare E. M. Gruber, Licia Bordi, Eleonora Lalle, Serena Quartu, Silvia Meschi, Daniele Lapa, Francesca Colavita, Roberta Chiappini, Antonio Mazzarelli, Patrizia Marsella, Nicola Petrosillo, Emanuele Nicastri, Giovanni Chillemi, Alessio Valentini, Alessandro Desideri, Antonino Di Caro, Giuseppe Ippolito, Maria R. Capobianchi Complete Genome Sequence of Escherichia coli O145:NM Bacteriophage vB_EcoM_AYO145A, a New Member of O1-Like Phages

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Genome Sequences of Mycobacteriophages AlanGrant, Baee, Corofin, OrangeOswald, and Vincenzo, New Members of Cluster B Welkin H. Pope, Maria E. Carbonara, Hanna M. Cioffi, Tyler Cruz, Brian Q. Dang, Alexander N. Doyle, Olivia H. Fan, Molly Gallagher, Gabrielle M. Gentile, Brian A. German, Margaret E. Farrell, Madeline Gerwig, Kelsey L. Hunter, Virginia E. Lefever, Nicole A. Marfisi, Jill E. McDonnell, Jappmann K. Monga, Kevin G. Quiroz, Alexandra C. Pong, Patrick A. Rimple, Michelle Situ, Peri C. Sohnen, Annmarie N. Stockinger, Paige K. Thompson, Nicole M. Torchio, Chelsea L. Toner, Megan C. Ulbrich, Neelam I. Vohra, Aala Zakir, Nancy L. Adkins, Bryony R. Brown, Bryce M. Churilla, Zachary J. Kramer, Jonathan S. Lapin, Matthew T. Montgomery, Ashley K. Prout, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull

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Genome Sequences of Cluster G Mycobacteriophages Cambiare, FlagStaff, and MOOREtheMARYer Welkin H. Pope, David A. Augustine, Daniel C. Carroll, Julia C. Duncan, Kyle M. Harwi, Rachel Howry, Bhavita Jagessar, Brandon A. Lum, Justin W. Meinert, Jeffrey S. Migliozzi, Katherine A. Milliken, Chandler J. Mitchell, Akanksha S. Nalatwad, Kaila C. Orlandini, Michael J. Rhein, Vishmayaa Saravanan, Brett A. Seese, Johnathon G. Schiebel, Kayla B. Thomas, Nancy L. Adkins, Karen L. Cohen, Varun B. Iyengar, Hannah Kim, Zachary J. Kramer, Matthew T. Montgomery, Claire E. Schafer, Kellyn E. Wilkes, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull

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Genome Sequence of Mycobacteriophage Mindy

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Welkin H. Pope, Nicholas I. Bernstein, Christina S. Fasolas, Nadia Mezghani, Catherine A. Pressimone, Priyanga Selvakumar, Ann-Catherine J. Stanton, Jonathan S. Lapin, Ashley K. Prout, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull Genome Sequence of Mycobacteriophage Phayonce

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Welkin H. Pope, Emily Jacobetz, Courtney A. Johnson, Brooke L. Kihle, Margaret A. Sobeski, Madison B. Werner, Nancy L. Adkins, Zachary J. Kramer, Matthew T. Montgomery, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull Genome Sequences of Mycobacteriophages Luchador and Nerujay

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Welkin H. Pope, Taha Ahmed, Marissa K. Drobitch, David R. Early, Soukaina Eljamri, Naomi S. Kasturiarachi, Emily F. Klonicki, Daniel T. Manjooran, Aífe N. Ní Chochlain, Andrew O. Puglionesi, Vinod Rajakumar, Katherine A. Shindle, Mai T. Tran, Bryony R. Brown, Bryce M. Churilla, Karen L. Cohen, Kellyn E. Wilkes, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull xx genomea.asm.org

May/June 2015 Volume 3 Issue 3

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Jiaying Wang, Yan D. Niu, Jinding Chen, Tim A. McAllister, Kim Stanford

CONTENTS • MAY/JUNE 2015 • VOLUME 3, NO. 3

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Complete Genome Sequence of a Recent Panzootic Virulent Newcastle Disease Virus from Pakistan Abdul Wajid, Muhammad Wasim, Shafqat F. Rehmani, Tasra Bibi, Nazir Ahmed, Claudio L. Afonso

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Full-Genome Sequence of the First G8P [14] Rotavirus Strain Detected in the United States Slavica Mijatovic-Rustempasic, Sunando Roy, Michele Sturgeon, Kunchala Rungsrisuriyachai, Erik Reisdorf, Margaret M. Cortese, Michael D. Bowen

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Genome Sequences of Six Paenibacillus larvae Siphoviridae Phages Susan Carson, Emily Bruff, William DeFoor, Jacob Dums, Adam Groth, Taylor Hatfield, Aruna Iyer, Kalyani Joshi, Sarah McAdams, Devon Miles, Delanie Miller, Abdoullah Oufkir, Brinkley Raynor, Sara Riley, Shelby Roland, Horace Rozier, Sarah Talley, Eric S. Miller

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Genome Sequence of a Newly Isolated Mycobacteriophage, ShedlockHolmes Welkin H. Pope, Jordan T. Carter, Kegan L. Dasher, Mikaela C. Haynberg, Anoop Reddi, Kathleen A. Shedlock, Jonathan S. Lapin, Ashley K. Prout, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull

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Draft Genome Sequences of Marine RNA Viruses SF-1, SF-2, and SF-3 Recovered from San Francisco Wastewater Alexander L. Greninger, Joseph L. DeRisi

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Draft Genome Sequences of Ciliovirus and Brinovirus from San Francisco Wastewater Alexander L. Greninger, Joseph L. DeRisi

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Complete Genome Sequences of Two Genetically Distinct Variants of Porcine Epidemic Diarrhea Virus in the Eastern Region of Thailand Thaniwan Cheun-Arom, Gun Temeeyasen, Anchalee Srijangwad, Thitima Tripipat, Suphattra Sangmalee, Dam Thi Vui, Taksina Chuanasa, Angkana Tantituvanont, Dachrit Nilubol

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Draft Genome Sequences of Leviviridae RNA Phages EC and MB Recovered from San Francisco Wastewater Alexander L. Greninger, Joseph L. DeRisi

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AUTHOR CORRECTION Correction for Bartoli et al., Whole-Genome Sequencing of 10 Pseudomonas syringae Strains Representing Different Host Range Spectra Claudia Bartoli, Sébastien Carrere, Jay Ram Lamichhane, Leonardo Varvaro, Cindy E. Morris RETRACTION Retraction for Abolnik, Complete Genome Sequence of Mycoplasma meleagridis, a Possible Emerging Pathogen in Chickens Celia Abolnik

May/June 2015 Volume 3 Issue 3

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Genome Sequence of Mycobacteriophage Momo Welkin H. Pope, Elizabeth A. Bina, Indraneel S. Brahme, Amy B. Hill, Philip H. Himmelstein, Sara M. Hunsicker, Amanda R. Ish, Tinh S. Le, Mary M. Martin, Catherine N. Moscinski, Sameer A. Shetty, Tomasz Swierzewski, Varun B. Iyengar, Hannah Kim, Claire E. Schafer, Sarah R. Grubb, Marcie H. Warner, Charles A. Bowman, Daniel A. Russell, Graham F. Hatfull